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  9. colour each ring according to the initial distance. It plots a
  10. prograde equalmass …" />
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  19. <main>
  20. <article id="content">
  21. <header>
  22. <h1 class="title"><code>analysis.ringPlot</code> module</h1>
  23. </header>
  24. <section id="section-intro">
  25. <p>Make a plot of an encountering with rings (fig 1, fig 3) and
  26. colour each ring according to the initial distance. It plots a
  27. prograde equalmass encounter by default.</p>
  28. <details class="source">
  29. <summary>Source code</summary>
  30. <pre><code class="python">&#34;&#34;&#34;Make a plot of an encountering with rings (fig 1, fig 3) and
  31. colour each ring according to the initial distance. It plots a
  32. prograde equalmass encounter by default.
  33. &#34;&#34;&#34;
  34. import matplotlib.pyplot as plt
  35. from scipy.interpolate import splprep, splev, interp1d
  36. from matplotlib import markers
  37. import numpy as np
  38. from analysis.colormaps import parula_map
  39. from analysis import utils
  40. def plotRings(ax, data, n):
  41. &#34;&#34;&#34;Make a ring plot of the data.
  42. Parameters:
  43. ax: the matplotlib axis where the data should be plotted
  44. data: a data dictionary in the format saved by the simulation
  45. n (int): the number of particles to plot. These will be interpolated
  46. and can be much higher than those originally in the simulation.
  47. &#34;&#34;&#34;
  48. # Identify all the rings
  49. rings = np.unique(data[&#39;type&#39;][:,1])
  50. rings = rings[rings!=&#39;0&#39;]
  51. # Plot each ring
  52. for ring, color, in zip(rings,
  53. parula_map(np.linspace(1.0, 0., len(rings)))):
  54. xy = data[&#39;r_vec&#39;][data[&#39;type&#39;][:,1]==ring] #data for this ring
  55. # Interpolate data (to use opacity to plot local density)
  56. tck, u = splprep(xy[:,:2].T, u=None, s=0.0, per=1)
  57. f = interp1d(np.linspace(0,1,len(u)), u, kind=&#39;cubic&#39;)
  58. x_new, y_new = splev(f(np.linspace(0,1,n)), tck, der=0)
  59. #Plot data
  60. ax.scatter(x_new, y_new, s=2, c=[color], alpha=0.01)
  61. utils.plotCOM(ax)
  62. utils.plotCenterMasses(ax, data)
  63. utils.plotTracks(ax, data[&#39;tracks&#39;])
  64. # Styling
  65. utils.setAxes(ax, mode=&#39;hide&#39;)
  66. ####################################
  67. ####################################
  68. # List of times to plot
  69. ts = [2000, 3000, 3500, 4000, 4900]
  70. figsize = (12, 4)
  71. fileName = &#39;prograde_equalmass&#39;
  72. f, axs = plt.subplots(1, len(ts), figsize=figsize, sharey=False)
  73. for t, ax in zip(ts, axs):
  74. data = utils.loadData(fileName, t)
  75. plotRings(ax, data, n=10000)
  76. height, width = 3.0, 3 * 1/len(ts) * figsize[0]/figsize[1]
  77. utils.setSize(ax, x=(-width, width), y=(-height, height), mode=&#39;square&#39;)
  78. f.subplots_adjust(hspace=0, wspace=0)
  79. plt.show()</code></pre>
  80. </details>
  81. </section>
  82. <section>
  83. </section>
  84. <section>
  85. </section>
  86. <section>
  87. <h2 class="section-title" id="header-functions">Functions</h2>
  88. <dl>
  89. <dt id="analysis.ringPlot.plotRings"><code class="name flex">
  90. <span>def <span class="ident">plotRings</span></span>(<span>ax, data, n)</span>
  91. </code></dt>
  92. <dd>
  93. <section class="desc"><p>Make a ring plot of the data.</p>
  94. <h2 id="parameters">Parameters</h2>
  95. <dl>
  96. <dt><strong><code>ax</code></strong></dt>
  97. <dd>the matplotlib axis where the data should be plotted</dd>
  98. <dt><strong><code>data</code></strong></dt>
  99. <dd>a data dictionary in the format saved by the simulation</dd>
  100. <dt><strong><code>n</code></strong> :&ensp;<code>int</code></dt>
  101. <dd>the number of particles to plot. These will be interpolated
  102. and can be much higher than those originally in the simulation.</dd>
  103. </dl></section>
  104. <details class="source">
  105. <summary>Source code</summary>
  106. <pre><code class="python">def plotRings(ax, data, n):
  107. &#34;&#34;&#34;Make a ring plot of the data.
  108. Parameters:
  109. ax: the matplotlib axis where the data should be plotted
  110. data: a data dictionary in the format saved by the simulation
  111. n (int): the number of particles to plot. These will be interpolated
  112. and can be much higher than those originally in the simulation.
  113. &#34;&#34;&#34;
  114. # Identify all the rings
  115. rings = np.unique(data[&#39;type&#39;][:,1])
  116. rings = rings[rings!=&#39;0&#39;]
  117. # Plot each ring
  118. for ring, color, in zip(rings,
  119. parula_map(np.linspace(1.0, 0., len(rings)))):
  120. xy = data[&#39;r_vec&#39;][data[&#39;type&#39;][:,1]==ring] #data for this ring
  121. # Interpolate data (to use opacity to plot local density)
  122. tck, u = splprep(xy[:,:2].T, u=None, s=0.0, per=1)
  123. f = interp1d(np.linspace(0,1,len(u)), u, kind=&#39;cubic&#39;)
  124. x_new, y_new = splev(f(np.linspace(0,1,n)), tck, der=0)
  125. #Plot data
  126. ax.scatter(x_new, y_new, s=2, c=[color], alpha=0.01)
  127. utils.plotCOM(ax)
  128. utils.plotCenterMasses(ax, data)
  129. utils.plotTracks(ax, data[&#39;tracks&#39;])
  130. # Styling
  131. utils.setAxes(ax, mode=&#39;hide&#39;)</code></pre>
  132. </details>
  133. </dd>
  134. </dl>
  135. </section>
  136. <section>
  137. </section>
  138. </article>
  139. <nav id="sidebar">
  140. <h1>Index</h1>
  141. <div class="toc">
  142. <ul></ul>
  143. </div>
  144. <ul id="index">
  145. <li><h3><a href="#header-functions">Functions</a></h3>
  146. <ul class="">
  147. <li><code><a title="analysis.ringPlot.plotRings" href="#analysis.ringPlot.plotRings">plotRings</a></code></li>
  148. </ul>
  149. </li>
  150. </ul>
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