Pushing to Github

.gitignore

@@ -1,2 +1,6 @@
+.vscode/
+.ropeproject/
+.DS_Store/
+.idea/
 data/
-__pycache__
+__pycache__

.vscode/.ropeproject/config.py

@@ -0,0 +1,114 @@
+# The default ``config.py``
+# flake8: noqa
+
+
+def set_prefs(prefs):
+    """This function is called before opening the project"""
+
+    # Specify which files and folders to ignore in the project.
+    # Changes to ignored resources are not added to the history and
+    # VCSs.  Also they are not returned in `Project.get_files()`.
+    # Note that ``?`` and ``*`` match all characters but slashes.
+    # '*.pyc': matches 'test.pyc' and 'pkg/test.pyc'
+    # 'mod*.pyc': matches 'test/mod1.pyc' but not 'mod/1.pyc'
+    # '.svn': matches 'pkg/.svn' and all of its children
+    # 'build/*.o': matches 'build/lib.o' but not 'build/sub/lib.o'
+    # 'build//*.o': matches 'build/lib.o' and 'build/sub/lib.o'
+    prefs['ignored_resources'] = ['*.pyc', '*~', '.ropeproject',
+                                  '.hg', '.svn', '_svn', '.git', '.tox']
+
+    # Specifies which files should be considered python files.  It is
+    # useful when you have scripts inside your project.  Only files
+    # ending with ``.py`` are considered to be python files by
+    # default.
+    # prefs['python_files'] = ['*.py']
+
+    # Custom source folders:  By default rope searches the project
+    # for finding source folders (folders that should be searched
+    # for finding modules).  You can add paths to that list.  Note
+    # that rope guesses project source folders correctly most of the
+    # time; use this if you have any problems.
+    # The folders should be relative to project root and use '/' for
+    # separating folders regardless of the platform rope is running on.
+    # 'src/my_source_folder' for instance.
+    # prefs.add('source_folders', 'src')
+
+    # You can extend python path for looking up modules
+    # prefs.add('python_path', '~/python/')
+
+    # Should rope save object information or not.
+    prefs['save_objectdb'] = True
+    prefs['compress_objectdb'] = False
+
+    # If `True`, rope analyzes each module when it is being saved.
+    prefs['automatic_soa'] = True
+    # The depth of calls to follow in static object analysis
+    prefs['soa_followed_calls'] = 0
+
+    # If `False` when running modules or unit tests "dynamic object
+    # analysis" is turned off.  This makes them much faster.
+    prefs['perform_doa'] = True
+
+    # Rope can check the validity of its object DB when running.
+    prefs['validate_objectdb'] = True
+
+    # How many undos to hold?
+    prefs['max_history_items'] = 32
+
+    # Shows whether to save history across sessions.
+    prefs['save_history'] = True
+    prefs['compress_history'] = False
+
+    # Set the number spaces used for indenting.  According to
+    # :PEP:`8`, it is best to use 4 spaces.  Since most of rope's
+    # unit-tests use 4 spaces it is more reliable, too.
+    prefs['indent_size'] = 4
+
+    # Builtin and c-extension modules that are allowed to be imported
+    # and inspected by rope.
+    prefs['extension_modules'] = []
+
+    # Add all standard c-extensions to extension_modules list.
+    prefs['import_dynload_stdmods'] = True
+
+    # If `True` modules with syntax errors are considered to be empty.
+    # The default value is `False`; When `False` syntax errors raise
+    # `rope.base.exceptions.ModuleSyntaxError` exception.
+    prefs['ignore_syntax_errors'] = False
+
+    # If `True`, rope ignores unresolvable imports.  Otherwise, they
+    # appear in the importing namespace.
+    prefs['ignore_bad_imports'] = False
+
+    # If `True`, rope will insert new module imports as
+    # `from <package> import <module>` by default.
+    prefs['prefer_module_from_imports'] = False
+
+    # If `True`, rope will transform a comma list of imports into
+    # multiple separate import statements when organizing
+    # imports.
+    prefs['split_imports'] = False
+
+    # If `True`, rope will remove all top-level import statements and
+    # reinsert them at the top of the module when making changes.
+    prefs['pull_imports_to_top'] = True
+
+    # If `True`, rope will sort imports alphabetically by module name instead
+    # of alphabetically by import statement, with from imports after normal
+    # imports.
+    prefs['sort_imports_alphabetically'] = False
+
+    # Location of implementation of
+    # rope.base.oi.type_hinting.interfaces.ITypeHintingFactory In general
+    # case, you don't have to change this value, unless you're an rope expert.
+    # Change this value to inject you own implementations of interfaces
+    # listed in module rope.base.oi.type_hinting.providers.interfaces
+    # For example, you can add you own providers for Django Models, or disable
+    # the search type-hinting in a class hierarchy, etc.
+    prefs['type_hinting_factory'] = (
+        'rope.base.oi.type_hinting.factory.default_type_hinting_factory')
+
+
+def project_opened(project):
+    """This function is called after opening the project"""
+    # Do whatever you like here!

.vscode/launch.json

@@ -0,0 +1,15 @@
+{
+    // Use IntelliSense to learn about possible attributes.
+    // Hover to view descriptions of existing attributes.
+    // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387
+    "version": "0.2.0",
+    "configurations": [
+        {
+            "name": "Python: Current File",
+            "type": "python",
+            "request": "launch",
+            "program": "${file}",
+            "console": "integratedTerminal"
+        }
+    ]
+}

.vscode/settings.json

@@ -0,0 +1,4 @@
+{
+    "python.dataScience.jupyterServerURI": "local",
+    "python.pythonPath": "/Users/Jesus/anaconda/bin/python"
+}

run_simulation.py

@@ -7,16 +7,16 @@ from utils import update_config
 from simulation import Simulation, Galaxy
 
 
-# Parse command line arguments: 
+# Parse command line arguments:
 # > python simulation.py config_file.yml output_folder
-parser = argparse.ArgumentParser(description='''Run a galactic 
+parser = argparse.ArgumentParser(description='''Run a galactic
 	collision simulation.''')
 parser.add_argument('config_file', type=argparse.FileType('r'),
-	help='''Path to configuration file for the simulation, in YAML format. 
+	help='''Path to configuration file for the simulation, in YAML format.
 	See the config folder for examples.''')
 parser.add_argument('--output_folder', default=None,
-	help='''Name of the output folder in data/ where the results will be 
-	saved. The directory will be created if necessary. If none is provided, 
+	help='''Name of the output folder in data/ where the results will be
+	saved. The directory will be created if necessary. If none is provided,
 	the name attribute in the configuration file will be used instead.''')
 parser.add_argument('--verbose', action='store_true', default=False,
 	help='''In verbose mode the simulation will print its progress.''')
@@ -28,16 +28,16 @@ CONFIG = yaml.load(open("config/default.yml", "r")) # default configuration
 updates = list(yaml.load_all(args.config_file))
 
 for update in updates:
-	# For multiple configurations in one file, 
+	# For multiple configurations in one file,
 	# the updates are with respect to the first one.
 	update_config(CONFIG, updates[0])
 	update_config(CONFIG, update)
 	# If no output folder is provided, the name in CONFIG is used instead
-	outputFolder = (CONFIG['name'] if args.output_folder is None 
+	outputFolder = (CONFIG['name'] if args.output_folder is None
 		else args.output_folder)
 
 	# Run the simulation
-	sim = Simulation(**CONFIG['simulation'], verbose=args.verbose, 
+	sim = Simulation(**CONFIG['simulation'], verbose=args.verbose,
 		CONFIG=CONFIG)
 	galaxy1 = Galaxy(**CONFIG['galaxy1'], sim=sim) # create the galaxies
 	galaxy2 = Galaxy(**CONFIG['galaxy2'], sim=sim)